Tuning BNDM with q-Grams
نویسندگان
چکیده
We develop bit-parallel algorithms for exact string matching. Our algorithms are variations of the BNDM and Shift-Or algorithms. At each alignment the algorithms read a q-gram before testing the state variable. In addition we apply reading a 2-gram in one instruction. Our experiments show that many of the new variations are substantially faster than any previous string matching algorithm on x86 processors for English and DNA data.
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